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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815718.1_cds_XP_016498442.1_12471
CDS Infomation

[gene=LOC107817184] [db_xref=GeneID:107817184] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g06840] [protein_id=XP_016498442.1] [location=complement(join(53127..53477,53832..53966,54541..54791,55751..55802,56165..56448,56559..56717,56808..57316,57872..57940,58070..58153,58272..58343,58488..58556,58669..58737,59403..59477,59611..59682,59811..59882,59975..60118,60436..60507,60637..60708,61875..62028,62900..62993))] [gbkey=CDS]
Sequence

ATGGAGGGAGTAAGATATTCTGGATATGTTTTTACTACGGCAATTTATTGTTTTATGCTA
CTTACAGTTGCTCAAGTTACTCATCCTTCTGAAGTCTCAGCTTTGATATCTGTAAAAAGT
GGTTTAATTGATAATATGGAGTATCTGAAGGATTGGCAGAAGGGTACTGATCCATGTACA
TCAAATTGGACTGAAGTTTATTGTTTTGACAAAGTTGGAACAGATGGTTACTTTCATGTC
AGAGAGCTCCGTTTGATGAATATGAATCTTTCTGGAAGTTTAGCTCCTGAGCTTGGACAA
CTATCCCATCTTAAAATTATGAATTTCATGTGGAATGATTTGACGGGAAGTGTACCAGGA
GAGATTGGAAACATCAAGTCTTTGAAACTTCTGCTCTTGAACGGAAACCGATTTTCAGGA
TCTTTACCTGATCAGCTTGGATATCTCTTGAACCTGAGAATATTCCAGATAGACCAGAAC
CAGATATCCGGAAGCATTCCTAAATCCTTTTCCCATTTAAATAGTATGCAGCATATCCAC
TTCAACAACAACTCACTGAGTGGTCAAATCCCTAAAGAACTTTCCAATATCTCCACTCTG
ATTCACTTGCTTTTGGACAGTAATAATCTTTCAGGATACCTTCCTCCTGAGTTTTCAGCA
TTTCCGTCTATTCGGATAATCCAACTTGATAACAACAATTTCAGCCATTCTGACATTCCA
GCTTCTTATGGAAACATTTCATCATTAGTGAAATTAAGTCTCAGAAACTGCAAGTTGCAA
GGATCCATTCCTGATCTTAGCAGAATACAGAACCTAAGCTATCTTGATCTCAGCTGGAAT
CAACTGTCTGGATCTATACCACAGAATAAGCTTTCCAACAATATGACAACTATTATTCTG
TCACACAATCGTCTTGATGGATCTATTCCGAAGAGCTTTTCCTCTATTCCCTCTTTGCAG
AAACTGTCATTGGAGAACAACCTTTTGAATGGTTCCTTTTCTACCGACATTTGGCAAAAG
AAGTTAACTTCAACTTCCAGACTTGATATTGATCTTCGGAATAATTCACTTTCGGACATT
TCGGGTACTCTTGAACCTCCTCTTAGTGTCACTCTAAGGTTGCAGGGAAATCCTGTGTGC
AGCAATGCGAGTGTAAGGAACATCATCAAATTCTGTGGTTCTGAAGCCAGAGCAGAACAT
GAGACAACTAACTCGACGAATGTAAATGGCTCTTGTCCTATTCATGCATGCCCTAAGGAT
AACTATTATGAATATGTCCCAACATCACCTGTTCCTTGCTCTTGTGCCTCGCCTCTAAGA
GTTGGATGGCGGCTGAAAAGTCCTAGTTTTTCTTACTTTGATCCATATGTGCATTACTTT
TTGCTGTATATGACTAGTGATCTTCATTTGGACCTTTACCAAATGTTGATTGAATCAAGT
TCTTGGGAAGAAGGACCTCGTCTACGAATGCACTTAAAGGTTTTCCCAGCAGTTGGGGTC
AGTACATTTAATAAAAGTGAGGTCATTCGTATTAGCGAGCTTTTCTCATCTTGGGATATC
AGTGTAGTTGACCTATTCGGACCTTACGAGCTCCTTAACTTCACTCTGTTGGGACCTTAT
TCGTACTTGAATCCTGATATTCAAGCTAAACATAAAAGCAAAGGTGCTTTGATAGCTGCA
ATTGTAGCAGGTGTTTTTGCTGCATTTGTTTCAACAATTATCGCTGTATTAATCAAAAGA
CAACATGCCAAATACCAAAGCATTCTATCATCAAGAAAACGTTTATCCTCAAGGCTCTCT
ATAAAAATGGATGGCATTAAAAGCTTCACCTTTAGAGAAATGACATTGGCCACTAACAAC
TTTGATAACTCAAATCAAGTTGGGGAAGGAGGATATGGGACTGTTTTTAAGGGAATTTTA
GCTGACAAAACAATCGTTGCTATCAAACGAGCAAAAGAAGGATCGCTACAAGGGCAAAAG
GAATTCTTGACAGAGATATCGCTGTTATCAAGGGTACATCACCGAAATCTAGTTTCGTTG
CTGGGATACTGTGATGAAGAAGGAGAACAGATGCTGGTTTATGAGTTCATGTGCAATGGA
ACTTTGCGAAACTGGATTTCTGTTACATGTAAAGAAAGTTTGAAGTTTGGAGCAAGATTG
CAGATTGCACTTGGTGCAGCTAAGGGCATCCTTTACCTTCATACAGAAGCTCACCCGCCG
ATATTCCACAGGGACATCAAAGCCAGCAATATTCTTCTAGACTCTAAAATGACAGCTAAA
GTTGCTGATTTTGGATTGTCTAGGCTTGCACCTGTGCAGGATGATGAAGGTGTATTACCT
AATCATGTATCAACTATTGTCAAGGGAACACCTGGTTACCTTGATCCTGAATATTTCTTG
ACCCGTAAATTGACCGATAAAAGTGATGTCTATAGCCTTGGAGTTGTATTTCTGGAAATC
TTAACCGGCATGCGCCCAATCTCACACGGGAAAAACATTGTTCGCGAGGTACACTTGGCT
CATGACTCGGAGAAGATGTACTCAGTCATGGACAGTACAATGGGACCTTACCCTTCTGAA
TGCATGGAAAAGTTTGCGGCTTTGGCCCTGAAGTGTTGCGAGGACAAACCAGAAGACAGA
CCTTCAATGTTAAAAGTGGTCAGGGAGCTGGAAACTATTCAGTCTATTCTCAACATGATT
CCAGATACTGAAGCTGATACAGTGGATTCTAAAACCAAGTTTAATGAACCAAAGTCATCG
TCTTCATTTTCTGAAACCACTAGCAGAGATGCATTTCTATCATCTGATGTGATGGGAGGT
TATAGTTTCAGTGGTGTCAGTCTCACTATGCCTCGCTAA

Peptide Sequence

PEP ID

XP_016498442.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Nicotiana tabacum]
Sequence

MEGVRYSGYVFTTAIYCFMLLTVAQVTHPSEVSALISVKSGLIDNMEYLKDWQKGTDPCT
SNWTEVYCFDKVGTDGYFHVRELRLMNMNLSGSLAPELGQLSHLKIMNFMWNDLTGSVPG
EIGNIKSLKLLLLNGNRFSGSLPDQLGYLLNLRIFQIDQNQISGSIPKSFSHLNSMQHIH
FNNNSLSGQIPKELSNISTLIHLLLDSNNLSGYLPPEFSAFPSIRIIQLDNNNFSHSDIP
ASYGNISSLVKLSLRNCKLQGSIPDLSRIQNLSYLDLSWNQLSGSIPQNKLSNNMTTIIL
SHNRLDGSIPKSFSSIPSLQKLSLENNLLNGSFSTDIWQKKLTSTSRLDIDLRNNSLSDI
SGTLEPPLSVTLRLQGNPVCSNASVRNIIKFCGSEARAEHETTNSTNVNGSCPIHACPKD
NYYEYVPTSPVPCSCASPLRVGWRLKSPSFSYFDPYVHYFLLYMTSDLHLDLYQMLIESS
SWEEGPRLRMHLKVFPAVGVSTFNKSEVIRISELFSSWDISVVDLFGPYELLNFTLLGPY
SYLNPDIQAKHKSKGALIAAIVAGVFAAFVSTIIAVLIKRQHAKYQSILSSRKRLSSRLS
IKMDGIKSFTFREMTLATNNFDNSNQVGEGGYGTVFKGILADKTIVAIKRAKEGSLQGQK
EFLTEISLLSRVHHRNLVSLLGYCDEEGEQMLVYEFMCNGTLRNWISVTCKESLKFGARL
QIALGAAKGILYLHTEAHPPIFHRDIKASNILLDSKMTAKVADFGLSRLAPVQDDEGVLP
NHVSTIVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEILTGMRPISHGKNIVREVHLA
HDSEKMYSVMDSTMGPYPSECMEKFAALALKCCEDKPEDRPSMLKVVRELETIQSILNMI
PDTEADTVDSKTKFNEPKSSSSFSETTSRDAFLSSDVMGGYSFSGVSLTMPR

Transcript Sequence

Gene sequence data has not been registered.